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Author SHA1 Message Date
Oliver Hahn
df94ef9fac merging upstream changes 2013-11-05 15:34:27 +01:00
Oliver Hahn
458607f2f6 cleaned up some compiler warnings appearing with newer versions of gcc (tested with gcc 4.8) 2013-11-05 15:34:00 +01:00
Oliver Hahn
86b85edadd re-enabled enforcing of mean density 2013-11-05 15:31:51 +01:00
Oliver Hahn
15788747b6 regions are now properly nested, i.e. ellipsoids are nested (not becoming cuboids 
at coarser levels), convex hulls are linearly scaled versions of one another...
 2013-11-04 19:02:48 +01:00
Oliver Hahn
68a31d791e added periodic real-space TF with new kernel and deconvolution of finite volume back in 2013-10-30 14:51:32 +01:00
Oliver Hahn
b975c5542a allowing for more iterations when approximating kernel volume integrals, 
no longer showing warning message when stopping subdivision
 2013-10-29 15:30:35 +01:00
Oliver Hahn
b719b1b479 minor fixes 2013-10-29 15:22:15 +01:00
Oliver Hahn
aa829134e2 seems like both k-space and new real space work well now, fixed a bug for k-space grid offsets 2013-10-29 13:23:47 +01:00
Oliver Hahn
3129083718 working backup commit to repository. maybe this one should not be used. 2013-10-29 09:45:47 +01:00
Oliver Hahn
a3b409352d Merged in dnelson86/music/dnelson86/bugfix-to-prevent-convex_hull-from-alway-1382647509467 (pull request #9) 
bugfix to prevent convex_hull from always resetting number of omp threads to 1
 2013-10-24 22:45:59 +02:00
Dylan Nelson
1b0b0b486d bugfix to prevent convex_hull from always resetting number of omp threads to 1 2013-10-24 20:45:10 +00:00
Oliver Hahn
5f467e81d5 tetmesh: fixed an error in GET_SUBSHIFT 2013-10-24 20:15:17 +02:00
Oliver Hahn
27a6ed893e tetmesh: fixed a bug when computing ref levels 2013-10-24 20:11:46 +02:00
Oliver Hahn
ace5dde0af tetmesh : added new option 'gadget_lagrangevertid' (default=yes) to toggle the usage of lagrange ids as vertex indices 2013-10-24 19:53:29 +02:00
Oliver Hahn
6c80b317c8 tetmesh: fixed block sizes when outputting/inputting 2013-10-24 19:37:41 +02:00
Oliver Hahn
2ef810611c tet mesh: writing out base level information to header, level written out is no w.r.t. this base level 2013-10-24 18:48:35 +02:00
Oliver Hahn
91133a23a4 tet mesh: writing out correct flags with lagrange IDs 2013-10-24 17:51:58 +02:00
Oliver Hahn
f0aad5b35f fixed a bug in tetmesh output with 3 particle types 2013-10-24 17:04:33 +02:00
Oliver Hahn
37c7f07b83 re-enabled global restriction after noise convolution (this needs to be selectively switched off after k-space noise convolution) 2013-10-24 16:58:27 +02:00
Oliver Hahn
3413f6f3a2 fixed type making type 3 instead of type 5 particles in header 2013-10-24 16:54:36 +02:00
Oliver Hahn
3193322bcd made low-resolution tetmesh particles to be type 5 now 2013-10-24 16:49:54 +02:00
Oliver Hahn
c03c80c53d more fixes to noise interpolation when using k-space sampled TF 2013-10-24 15:59:16 +02:00
Oliver Hahn
f6a8398982 fixed periodic boundary conditions for tet-mesh 2013-10-24 13:40:54 +02:00
Oliver Hahn
5637c20bae fixed a variable reference that has been removed 2013-10-24 12:51:51 +02:00
Oliver Hahn
f19103d266 cleanup and fixes. k-space sampling still needs proper testing (and likely some more fixes) 2013-10-24 12:48:35 +02:00
Oliver Hahn
9ee8a0a6a9 added header file inclusion to avoid compilation errors 2013-10-24 12:33:58 +02:00
Oliver Hahn
870107d09c updated k-space sampling of power spectrum on nested hierarchies 2013-10-24 12:28:48 +02:00
Oliver Hahn
7beb94a1c7 tetmesh output: type 2 particles now *do* carry masses 2013-10-24 12:22:46 +02:00
Oliver Hahn
6d7672ee43 fixed a problem with writing vertex ids for tetmesh output 2013-10-24 11:47:43 +02:00
Oliver Hahn
64c06439e5 reverted makefile 2013-10-24 11:29:56 +02:00
Oliver Hahn
ffcc295ffc merge 2013-10-24 11:27:31 +02:00
Oliver Hahn
c74e6dbd55 added missing random number plugin 2013-10-24 11:27:09 +02:00
Raul Angulo
14c92dd4ff adding missing headers 2013-10-24 11:20:01 +02:00
Oliver Hahn
ccaf6762bd merging upstream changes 2013-10-24 10:53:40 +02:00
Oliver Hahn
82beef69a6 fixed a bug when expanding convex hulls 2013-10-23 23:16:47 +02:00
Oliver Hahn
f920a3377e merge 2013-10-23 23:03:59 +02:00
Oliver Hahn
90f0d15170 merge (with experimental new rewrite of random number factory) 2013-10-23 23:03:28 +02:00
Oliver Hahn
507b6daa41 added output plugin with refined tetrahedral mesh connectivity structure 2013-10-23 22:56:35 +02:00
Dylan Nelson
3c67f672d3 fix potential segfault related to STL in convex_hull.hh 2013-10-22 18:30:10 +00:00
Dylan Nelson
60d2aede0f generalize output_arepo for non-box regions 2013-10-22 18:28:48 +00:00
Oliver Hahn
a1cf2812fe fixed a bug when expanding convex hulls 2013-10-17 17:27:56 +02:00
Oliver Hahn
9bcedeb883 some fixes to density coarsening 2013-10-17 16:35:30 +02:00
Oliver Hahn
c7d5e09e4f fixed leftover diff marks in Makefile 2013-10-13 00:16:25 +02:00
Oliver Hahn
09c8251d06 merge 2013-10-13 00:14:26 +02:00
Oliver Hahn
97ba38177b fixed missing coarsening when levelmin_TF is set 2013-10-12 23:57:14 +02:00
Oliver Hahn
b4af40ed57 fixed fft interpolation for fft-kernel 2013-10-10 23:33:16 +02:00
Oliver Hahn
7177cfe2bf initial local commit of MUSIC 2.0 2013-10-10 23:24:21 +02:00
Oliver Hahn
3eca845d10 merge 2013-09-25 21:04:28 +02:00
Oliver Hahn
ef46d58653 added new parameter file options to specify the bounding ellipsoid directly, 
the new options are region_ellipsoid_matrix[0-2] for the matrix and
region_ellipsoid_center for the ellipsoid center.

fixed a bug that caused velocity data to be used from region_point file
(need to check the units in all tools, so better to disable it atm)
 2013-09-25 21:02:12 +02:00
Oliver Hahn
814247421b added parameters to specify the ellipsoid explicitly 2013-09-25 06:05:17 +02:00