mirror of
https://github.com/glatterf42/music-panphasia.git
synced 2024-09-18 15:03:45 +02:00
Singlepresicion compiling again, swift output added.
This commit is contained in:
glatterf42
parent
1e32e12349
commit
eb05197bb5
10 changed files with 836 additions and 7 deletions
8
.gitignore
vendored
Normal file
8
.gitignore
vendored
Normal file
|
|
@ -0,0 +1,8 @@
|
|||
*.conf
|
||||
.vscode/
|
||||
MUSIC
|
||||
*.o
|
||||
*.patch
|
||||
test/
|
||||
Eagle_camb_file_wide
|
||||
*.txt
|
||||
11
Makefile
11
Makefile
|
|
@ -11,16 +11,17 @@ BOXLIB_HOME = ${HOME}/nyx_tot_sterben/BoxLib
|
|||
|
||||
##############################################################################
|
||||
### compiler and path settings
|
||||
CC = g++-11 ## icpc
|
||||
FF = gfortran-11 # needed only for panphasia, or ## ifort
|
||||
CC = g++ ## icpc
|
||||
FF = gfortran-11# needed only for panphasia, or ## ifort
|
||||
LINKER = g++-11 ## ifort # need to link with ifort if using intel
|
||||
OPT = -Wall -Wno-unknown-pragmas -O3 -mtune=native #-fsanitize=address -fno-omit-frame-pointer
|
||||
CFLAGS =
|
||||
LFLAGS = -lgsl -lgslcblas -fsanitize=thread # -fsanitize=address -fno-omit-frame-pointer
|
||||
LFLAGS = -lgsl -lgslcblas #-fsanitize=thread #-fsanitize=address -fno-omit-frame-pointer
|
||||
FFLAGS = -ffixed-line-length-132 -O3 -fimplicit-none -g #-fsanitize=address -fno-omit-frame-pointer## use for gfortran
|
||||
#FFLAGS = -extend_source -O3 -fimplicit-none -g ## use for ifort
|
||||
CPATHS = -I. -I$(HOME)/local/include -I/opt/local/include -I/usr/local/include
|
||||
LPATHS = -L$(HOME)/local/lib -L/opt/local/lib -L/usr/local/lib
|
||||
CPATHS = -I. -I$(HOME)/local/include -I/opt/local/include -I/usr/local/include -I/usr/include/hdf5/serial
|
||||
LPATHS = -L$(HOME)/local/lib -L/opt/local/lib -L/usr/local/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial
|
||||
|
||||
|
||||
##############################################################################
|
||||
# if you have FFTW 2.1.5 or 3.x with multi-thread support, you can enable the
|
||||
|
|
|
|||
|
|
@ -109,7 +109,11 @@ template <typename m1, typename m2> void fft_coarsen(m1 &v, m2 &V) {
|
|||
|
||||
std::complex<real_t> val_phas(cos(phase), sin(phase));
|
||||
|
||||
#ifdef SINGLE_PRECISION
|
||||
val_fine *= val_phas * fftnorm / 8.0f; // sqrt(8.0);
|
||||
#else
|
||||
val_fine *= val_phas * fftnorm / 8.0; // sqrt(8.0);
|
||||
#endif
|
||||
|
||||
RE(ccoarse[qc]) = val_fine.real();
|
||||
IM(ccoarse[qc]) = val_fine.imag();
|
||||
|
|
|
|||
BIN
pan_state.mod
BIN
pan_state.mod
Binary file not shown.
|
|
@ -714,6 +714,7 @@ public:
|
|||
HDFWriteGroupAttribute(filename, "Header", "suggested_gridboost", gridboost);
|
||||
HDFWriteGroupAttribute(filename, "Header", "suggested_highressoft", softening);
|
||||
HDFWriteGroupAttribute(filename, "Header", "suggested_gas_Tinit", Tini);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Flag_Entropy_ICs", 0);
|
||||
}
|
||||
|
||||
// give config/parameter file hints
|
||||
|
|
|
|||
815
plugins/output_swift.cc
Normal file
815
plugins/output_swift.cc
Normal file
|
|
@ -0,0 +1,815 @@
|
|||
/*
|
||||
* output_arepo.cc - This file is part of MUSIC -
|
||||
* a code to generate multi-scale initial conditions
|
||||
* for cosmological simulations
|
||||
*
|
||||
* Copyright (C) 2010 Oliver Hahn
|
||||
*
|
||||
* Plugin: Dylan Nelson (dnelson@cfa.harvard.edu)
|
||||
*/
|
||||
|
||||
#ifdef HAVE_HDF5
|
||||
|
||||
#define GAS_PARTTYPE 0
|
||||
#define HIGHRES_DM_PARTTYPE 1
|
||||
#define COARSE_DM_DEFAULT_PARTTYPE 2
|
||||
#define STAR_PARTTYPE 4
|
||||
#define NTYPES 6
|
||||
|
||||
#include "HDF_IO.hh"
|
||||
#include "output.hh"
|
||||
#include <algorithm>
|
||||
#include <sstream>
|
||||
#include <string>
|
||||
|
||||
class swift_output_plugin : public output_plugin {
|
||||
protected:
|
||||
// header/config
|
||||
std::vector<std::vector<unsigned int>> nPart;
|
||||
std::vector<long long> nPartTotal;
|
||||
std::vector<double> massTable;
|
||||
double time, redshift, boxSize;
|
||||
unsigned int numFiles, coarsePartType;
|
||||
|
||||
double omega0, omega_L, hubbleParam;
|
||||
|
||||
// configuration
|
||||
double UnitLength_in_cm, UnitMass_in_g, UnitVelocity_in_cm_per_s;
|
||||
double omega_b, rhoCrit;
|
||||
double posFac, velFac;
|
||||
long long nPartTotAllTypes;
|
||||
bool doBaryons, useLongIDs, doublePrec;
|
||||
|
||||
size_t npfine, npart, npcoarse;
|
||||
std::vector<size_t> levelcounts;
|
||||
|
||||
// parameter file hints
|
||||
int pmgrid, gridboost;
|
||||
float softening, Tini;
|
||||
|
||||
using output_plugin::cf_;
|
||||
|
||||
// Nx1 vector (e.g. masses,particleids)
|
||||
template <typename T> void writeHDF5_a(std::string fieldName, int partTypeNum, const std::vector<T> &data) {
|
||||
hid_t HDF_FileID, HDF_GroupID, HDF_DatasetID, HDF_DataspaceID, HDF_Type;
|
||||
hsize_t HDF_Dims, offset = 0;
|
||||
|
||||
std::stringstream GrpName;
|
||||
GrpName << "PartType" << partTypeNum;
|
||||
|
||||
for (unsigned i = 0; i < numFiles; i++) {
|
||||
std::string filename = fname_;
|
||||
HDF_Dims = data.size();
|
||||
|
||||
// modify local filename and write size
|
||||
if (numFiles > 1) {
|
||||
std::stringstream s;
|
||||
s << "." << i << ".hdf5";
|
||||
filename.replace(filename.find(".hdf5"), 5, s.str());
|
||||
|
||||
HDF_Dims = ceil(data.size() / numFiles);
|
||||
if (i == numFiles - 1)
|
||||
HDF_Dims = data.size() - offset;
|
||||
}
|
||||
|
||||
HDF_FileID = H5Fopen(filename.c_str(), H5F_ACC_RDWR, H5P_DEFAULT);
|
||||
HDF_GroupID = H5Gopen(HDF_FileID, GrpName.str().c_str());
|
||||
|
||||
HDF_Type = GetDataType<T>();
|
||||
HDF_DataspaceID = H5Screate_simple(1, &HDF_Dims, NULL);
|
||||
HDF_DatasetID = H5Dcreate(HDF_GroupID, fieldName.c_str(), HDF_Type, HDF_DataspaceID, H5P_DEFAULT);
|
||||
|
||||
// write and close
|
||||
H5Dwrite(HDF_DatasetID, HDF_Type, H5S_ALL, H5S_ALL, H5P_DEFAULT, &data[offset]);
|
||||
|
||||
H5Dclose(HDF_DatasetID);
|
||||
H5Sclose(HDF_DataspaceID);
|
||||
|
||||
H5Gclose(HDF_GroupID);
|
||||
H5Fclose(HDF_FileID);
|
||||
|
||||
offset += HDF_Dims;
|
||||
}
|
||||
}
|
||||
|
||||
// Nx3 vector (e.g. pos,vel), where coord = index of the second dimension (written one at a time)
|
||||
template <typename T>
|
||||
void writeHDF5_b(std::string fieldName, int coord, int partTypeNum, std::vector<T> &data, bool readFlag = false) {
|
||||
hid_t HDF_FileID, HDF_GroupID, HDF_DatasetID, HDF_DataspaceID, HDF_Type;
|
||||
hsize_t HDF_Dims[2], HDF_DimsMem[2], w_offset = 0;
|
||||
|
||||
std::stringstream GrpName;
|
||||
GrpName << "PartType" << partTypeNum;
|
||||
|
||||
for (unsigned i = 0; i < numFiles; i++) {
|
||||
std::string filename = fname_;
|
||||
HDF_Dims[0] = data.size();
|
||||
|
||||
// modify local filename and write size
|
||||
if (numFiles > 1) {
|
||||
std::stringstream s;
|
||||
s << "." << i << ".hdf5";
|
||||
filename.replace(filename.find(".hdf5"), 5, s.str());
|
||||
|
||||
HDF_Dims[0] = ceil(data.size() / numFiles);
|
||||
if (i == numFiles - 1)
|
||||
HDF_Dims[0] = data.size() - w_offset;
|
||||
}
|
||||
|
||||
HDF_FileID = H5Fopen(filename.c_str(), H5F_ACC_RDWR, H5P_DEFAULT);
|
||||
HDF_GroupID = H5Gopen(HDF_FileID, GrpName.str().c_str());
|
||||
|
||||
HDF_Type = GetDataType<T>();
|
||||
HDF_Dims[1] = 3;
|
||||
|
||||
// if dataset does not yet exist, create it (on first coord call)
|
||||
if (!(H5Lexists(HDF_GroupID, fieldName.c_str(), H5P_DEFAULT))) {
|
||||
HDF_DataspaceID = H5Screate_simple(2, HDF_Dims, NULL);
|
||||
HDF_DatasetID = H5Dcreate(HDF_GroupID, fieldName.c_str(), HDF_Type, HDF_DataspaceID, H5P_DEFAULT);
|
||||
|
||||
H5Sclose(HDF_DataspaceID);
|
||||
H5Dclose(HDF_DatasetID);
|
||||
}
|
||||
|
||||
// make memory space (just indicates the size/shape of data)
|
||||
HDF_DimsMem[0] = HDF_Dims[0];
|
||||
HDF_DimsMem[1] = 1;
|
||||
hid_t HDF_MemoryspaceID = H5Screate_simple(2, HDF_DimsMem, NULL);
|
||||
|
||||
// open hyperslab
|
||||
hsize_t count[2] = {1, 1}, stride[2] = {1, 1}, offset[2] = {0, 0};
|
||||
|
||||
offset[1] = coord; // set where in the second dimension to write
|
||||
count[0] = HDF_Dims[0]; // set size in the first dimension (num particles of this type)
|
||||
|
||||
HDF_DatasetID = H5Dopen(HDF_GroupID, fieldName.c_str());
|
||||
HDF_DataspaceID = H5Dget_space(HDF_DatasetID);
|
||||
|
||||
H5Sselect_hyperslab(HDF_DataspaceID, H5S_SELECT_SET, offset, stride, count, NULL);
|
||||
|
||||
// write (or read) and close
|
||||
if (readFlag)
|
||||
H5Dread(HDF_DatasetID, HDF_Type, HDF_MemoryspaceID, HDF_DataspaceID, H5P_DEFAULT, &data[w_offset]);
|
||||
else
|
||||
H5Dwrite(HDF_DatasetID, HDF_Type, HDF_MemoryspaceID, HDF_DataspaceID, H5P_DEFAULT, &data[w_offset]);
|
||||
|
||||
H5Dclose(HDF_DatasetID);
|
||||
H5Gclose(HDF_GroupID);
|
||||
H5Fclose(HDF_FileID);
|
||||
|
||||
w_offset += HDF_Dims[0];
|
||||
}
|
||||
}
|
||||
|
||||
// called from finalize()
|
||||
void generateAndWriteIDs(void) {
|
||||
long long offset = 1; // don't use ID==0
|
||||
nPartTotAllTypes = 0;
|
||||
|
||||
for (size_t i = 0; i < nPartTotal.size(); i++) {
|
||||
if (!nPartTotal[i])
|
||||
continue;
|
||||
|
||||
nPartTotAllTypes += nPartTotal[i];
|
||||
|
||||
if (!useLongIDs) {
|
||||
std::vector<int> ids = std::vector<int>(nPartTotal[i]);
|
||||
for (int j = 0; j < nPartTotal[i]; j++)
|
||||
ids[j] = offset + j;
|
||||
|
||||
writeHDF5_a("ParticleIDs", i, ids);
|
||||
} else {
|
||||
std::vector<long long> ids = std::vector<long long>(nPartTotal[i]);
|
||||
for (long long j = 0; j < nPartTotal[i]; j++)
|
||||
ids[j] = offset + j;
|
||||
|
||||
writeHDF5_a("ParticleIDs", i, ids);
|
||||
}
|
||||
|
||||
// make IDs of all particle types sequential (unique) = unnecessary, but consistent with gadget output format
|
||||
offset += nPartTotal[i];
|
||||
}
|
||||
}
|
||||
|
||||
void countLeafCells(const grid_hierarchy &gh) {
|
||||
npfine = 0;
|
||||
npart = 0;
|
||||
npcoarse = 0;
|
||||
|
||||
npfine = gh.count_leaf_cells(gh.levelmax(), gh.levelmax());
|
||||
npart = gh.count_leaf_cells(gh.levelmin(), gh.levelmax());
|
||||
|
||||
if (levelmax_ != levelmin_) // multimass
|
||||
npcoarse = gh.count_leaf_cells(gh.levelmin(), gh.levelmax() - 1);
|
||||
}
|
||||
|
||||
template <typename T> void __write_dm_mass(const grid_hierarchy &gh) {
|
||||
countLeafCells(gh);
|
||||
|
||||
// FINE: collect velocities and convert to correct units
|
||||
int ilevel = gh.levelmax();
|
||||
|
||||
std::vector<T> data(npfine);
|
||||
size_t count = 0;
|
||||
|
||||
for (unsigned i = 0; i < gh.get_grid(ilevel)->size(0); ++i)
|
||||
for (unsigned j = 0; j < gh.get_grid(ilevel)->size(1); ++j)
|
||||
for (unsigned k = 0; k < gh.get_grid(ilevel)->size(2); ++k)
|
||||
if (gh.is_in_mask(ilevel, i, j, k) && !gh.is_refined(ilevel, i, j, k)) {
|
||||
if (!doBaryons)
|
||||
data[count++] = omega0 * rhoCrit * pow(boxSize * posFac, 3.0) / pow(2, 3 * levelmax_);
|
||||
else
|
||||
data[count++] = (omega0 - omega_b) * rhoCrit * pow(boxSize * posFac, 3.0) / pow(2, 3 * levelmax_);
|
||||
}
|
||||
|
||||
writeHDF5_a("Masses", HIGHRES_DM_PARTTYPE, data); // write fine DM
|
||||
|
||||
if (count != npfine)
|
||||
throw std::runtime_error("Internal consistency error while writing fine DM masses");
|
||||
|
||||
// fill levelcount for header
|
||||
levelcounts = std::vector<size_t>(levelmax_ - levelmin_ + 1);
|
||||
for (int ilevel = gh.levelmax(); ilevel >= (int)gh.levelmin(); --ilevel)
|
||||
levelcounts[gh.levelmax() - ilevel] = gh.count_leaf_cells(ilevel, ilevel);
|
||||
|
||||
if (levelmax_ > levelmin_ + 1) // morethan2bnd
|
||||
{
|
||||
// DM particles will have variable masses
|
||||
size_t count = 0;
|
||||
|
||||
std::vector<T> data(npcoarse);
|
||||
|
||||
for (int ilevel = gh.levelmax() - 1; ilevel >= (int)gh.levelmin(); --ilevel) {
|
||||
// baryon particles live only on finest grid, these particles here are total matter particles
|
||||
T pmass = omega0 * rhoCrit * pow(boxSize * posFac, 3.0) / pow(2, 3 * ilevel);
|
||||
|
||||
for (unsigned i = 0; i < gh.get_grid(ilevel)->size(0); ++i)
|
||||
for (unsigned j = 0; j < gh.get_grid(ilevel)->size(1); ++j)
|
||||
for (unsigned k = 0; k < gh.get_grid(ilevel)->size(2); ++k)
|
||||
if (gh.is_in_mask(ilevel, i, j, k) && !gh.is_refined(ilevel, i, j, k)) {
|
||||
data[count++] = pmass;
|
||||
}
|
||||
}
|
||||
|
||||
if (count != npcoarse)
|
||||
throw std::runtime_error("Internal consistency error while writing masses");
|
||||
|
||||
writeHDF5_a("Masses", coarsePartType, data); // write DM
|
||||
|
||||
} else {
|
||||
// DM particles will all have the same mass, just write to massTable
|
||||
if (levelmax_ != levelmin_) // multimass
|
||||
massTable[coarsePartType] = omega0 * rhoCrit * pow(boxSize * posFac, 3.0) / pow(2, 3 * levelmin_);
|
||||
}
|
||||
}
|
||||
|
||||
template <typename T> void __write_dm_position(int coord, const grid_hierarchy &gh) {
|
||||
countLeafCells(gh);
|
||||
|
||||
// update header
|
||||
hsize_t offset_fine = 0, offset_coarse = 0;
|
||||
|
||||
for (unsigned i = 0; i < numFiles; i++) {
|
||||
hsize_t dims_fine = ceil(npfine / numFiles);
|
||||
hsize_t dims_coarse = ceil(npcoarse / numFiles);
|
||||
|
||||
if (i == numFiles - 1) {
|
||||
dims_fine = npfine - offset_fine;
|
||||
dims_coarse = npcoarse - offset_coarse;
|
||||
}
|
||||
|
||||
nPart[i][HIGHRES_DM_PARTTYPE] = dims_fine;
|
||||
nPart[i][coarsePartType] = dims_coarse;
|
||||
|
||||
offset_fine += dims_fine;
|
||||
offset_coarse += dims_coarse;
|
||||
}
|
||||
|
||||
nPartTotal[HIGHRES_DM_PARTTYPE] = npfine;
|
||||
nPartTotal[coarsePartType] = npcoarse;
|
||||
|
||||
// FINE: collect displacements and convert to absolute coordinates with correct units
|
||||
int ilevel = gh.levelmax();
|
||||
|
||||
std::vector<T> data(npfine);
|
||||
size_t count = 0;
|
||||
|
||||
for (unsigned i = 0; i < gh.get_grid(ilevel)->size(0); ++i)
|
||||
for (unsigned j = 0; j < gh.get_grid(ilevel)->size(1); ++j)
|
||||
for (unsigned k = 0; k < gh.get_grid(ilevel)->size(2); ++k)
|
||||
if (gh.is_in_mask(ilevel, i, j, k) && !gh.is_refined(ilevel, i, j, k)) {
|
||||
double xx[3];
|
||||
gh.cell_pos(ilevel, i, j, k, xx);
|
||||
|
||||
xx[coord] = (xx[coord] + (*gh.get_grid(ilevel))(i, j, k)) * boxSize;
|
||||
xx[coord] = fmod(xx[coord] + boxSize, boxSize); //added fmod here (see below), otherwise only takes latter value
|
||||
|
||||
data[count++] = (T)(xx[coord] * posFac);
|
||||
}
|
||||
|
||||
writeHDF5_b("Coordinates", coord, HIGHRES_DM_PARTTYPE, data); // write fine DM
|
||||
|
||||
if (count != npfine)
|
||||
throw std::runtime_error("Internal consistency error while writing fine DM pos");
|
||||
|
||||
// COARSE: collect displacements and convert to absolute coordinates with correct units
|
||||
if (levelmax_ != levelmin_) // multimass
|
||||
{
|
||||
data = std::vector<T>(npcoarse, 0.0);
|
||||
count = 0;
|
||||
|
||||
for (int ilevel = gh.levelmax() - 1; ilevel >= (int)gh.levelmin(); --ilevel)
|
||||
for (unsigned i = 0; i < gh.get_grid(ilevel)->size(0); ++i)
|
||||
for (unsigned j = 0; j < gh.get_grid(ilevel)->size(1); ++j)
|
||||
for (unsigned k = 0; k < gh.get_grid(ilevel)->size(2); ++k)
|
||||
if (gh.is_in_mask(ilevel, i, j, k) && !gh.is_refined(ilevel, i, j, k)) {
|
||||
double xx[3];
|
||||
gh.cell_pos(ilevel, i, j, k, xx);
|
||||
|
||||
xx[coord] = (xx[coord] + (*gh.get_grid(ilevel))(i, j, k)) * boxSize;
|
||||
|
||||
if (!doBaryons) // if so, we will handle the mod in write_gas_position
|
||||
xx[coord] = fmod(xx[coord] + boxSize, boxSize) * posFac;
|
||||
|
||||
data[count++] = (T)xx[coord];
|
||||
}
|
||||
|
||||
if (count != npcoarse)
|
||||
throw std::runtime_error("Internal consistency error while writing coarse DM pos");
|
||||
|
||||
writeHDF5_b("Coordinates", coord, coarsePartType, data); // write coarse DM
|
||||
}
|
||||
}
|
||||
|
||||
template <typename T> void __write_dm_velocity(int coord, const grid_hierarchy &gh) {
|
||||
countLeafCells(gh);
|
||||
|
||||
// FINE: collect velocities and convert to correct units
|
||||
int ilevel = gh.levelmax();
|
||||
|
||||
std::vector<T> data(npfine);
|
||||
size_t count = 0;
|
||||
|
||||
for (unsigned i = 0; i < gh.get_grid(ilevel)->size(0); ++i)
|
||||
for (unsigned j = 0; j < gh.get_grid(ilevel)->size(1); ++j)
|
||||
for (unsigned k = 0; k < gh.get_grid(ilevel)->size(2); ++k)
|
||||
if (gh.is_in_mask(ilevel, i, j, k) && !gh.is_refined(ilevel, i, j, k)) {
|
||||
data[count++] = (T)(*gh.get_grid(ilevel))(i, j, k) * velFac;
|
||||
}
|
||||
|
||||
writeHDF5_b("Velocities", coord, HIGHRES_DM_PARTTYPE, data); // write fine DM
|
||||
|
||||
if (count != npfine)
|
||||
throw std::runtime_error("Internal consistency error while writing fine DM pos");
|
||||
|
||||
// COARSE: collect velocities and convert to correct units
|
||||
if (levelmax_ != levelmin_) // multimass
|
||||
{
|
||||
data = std::vector<T>(npcoarse, 0.0);
|
||||
count = 0;
|
||||
|
||||
for (int ilevel = gh.levelmax() - 1; ilevel >= (int)gh.levelmin(); --ilevel)
|
||||
for (unsigned i = 0; i < gh.get_grid(ilevel)->size(0); ++i)
|
||||
for (unsigned j = 0; j < gh.get_grid(ilevel)->size(1); ++j)
|
||||
for (unsigned k = 0; k < gh.get_grid(ilevel)->size(2); ++k)
|
||||
if (gh.is_in_mask(ilevel, i, j, k) && !gh.is_refined(ilevel, i, j, k)) {
|
||||
data[count++] = (T)(*gh.get_grid(ilevel))(i, j, k) * velFac;
|
||||
}
|
||||
|
||||
if (count != npcoarse)
|
||||
throw std::runtime_error("Internal consistency error while writing coarse DM pos");
|
||||
|
||||
writeHDF5_b("Velocities", coord, coarsePartType, data); // write coarse DM
|
||||
}
|
||||
}
|
||||
|
||||
template <typename T> void __write_gas_velocity(int coord, const grid_hierarchy &gh) {
|
||||
countLeafCells(gh);
|
||||
|
||||
std::vector<T> gas_data(npart); // read/write gas at all levels from the gh
|
||||
size_t count = 0;
|
||||
|
||||
for (int ilevel = levelmax_; ilevel >= (int)levelmin_; --ilevel)
|
||||
for (unsigned i = 0; i < gh.get_grid(ilevel)->size(0); ++i)
|
||||
for (unsigned j = 0; j < gh.get_grid(ilevel)->size(1); ++j)
|
||||
for (unsigned k = 0; k < gh.get_grid(ilevel)->size(2); ++k)
|
||||
if (gh.is_in_mask(ilevel, i, j, k) && !gh.is_refined(ilevel, i, j, k)) {
|
||||
gas_data[count++] = (T)(*gh.get_grid(ilevel))(i, j, k) * velFac;
|
||||
}
|
||||
|
||||
if (count != npart)
|
||||
throw std::runtime_error("Internal consistency error while writing GAS pos");
|
||||
|
||||
// calculate modified DM velocities if: multimass and baryons present
|
||||
if (doBaryons && npcoarse) {
|
||||
double facb = omega_b / omega0;
|
||||
double facc = (omega0 - omega_b) / omega0;
|
||||
|
||||
std::vector<T> dm_data(npcoarse);
|
||||
|
||||
writeHDF5_b("Velocities", coord, coarsePartType, dm_data, true); // read coarse DM vels
|
||||
|
||||
// overwrite
|
||||
for (size_t i = 0; i < npcoarse; i++)
|
||||
dm_data[i] = facc * dm_data[i] + facb * gas_data[npfine + i];
|
||||
|
||||
writeHDF5_b("Velocities", coord, coarsePartType, dm_data); // overwrite coarse DM vels
|
||||
} // dm_data deallocated
|
||||
|
||||
// restrict gas_data to fine only and request write
|
||||
std::vector<T> data(gas_data.begin() + 0, gas_data.begin() + npfine);
|
||||
|
||||
std::vector<T>().swap(gas_data); // deallocate
|
||||
|
||||
writeHDF5_b("Velocities", coord, GAS_PARTTYPE, data); // write highres gas
|
||||
}
|
||||
|
||||
template <typename T> void __write_gas_position(int coord, const grid_hierarchy &gh) {
|
||||
countLeafCells(gh);
|
||||
|
||||
// update header (will actually write only gas at levelmax)
|
||||
hsize_t offset = 0;
|
||||
|
||||
for (unsigned i = 0; i < numFiles; i++) {
|
||||
hsize_t dims = ceil(npfine / numFiles);
|
||||
if (i == numFiles - 1)
|
||||
dims = npfine - offset;
|
||||
|
||||
nPart[i][GAS_PARTTYPE] = dims;
|
||||
offset += dims;
|
||||
}
|
||||
|
||||
nPartTotal[GAS_PARTTYPE] = npfine;
|
||||
|
||||
std::vector<double> gas_data(npart); // read/write gas at all levels from the gh
|
||||
size_t count = 0;
|
||||
|
||||
double h = 1.0 / (1ul << gh.levelmax());
|
||||
|
||||
for (int ilevel = gh.levelmax(); ilevel >= (int)gh.levelmin(); --ilevel)
|
||||
for (unsigned i = 0; i < gh.get_grid(ilevel)->size(0); ++i)
|
||||
for (unsigned j = 0; j < gh.get_grid(ilevel)->size(1); ++j)
|
||||
for (unsigned k = 0; k < gh.get_grid(ilevel)->size(2); ++k)
|
||||
if (gh.is_in_mask(ilevel, i, j, k) && !gh.is_refined(ilevel, i, j, k)) {
|
||||
double xx[3];
|
||||
gh.cell_pos(ilevel, i, j, k, xx);
|
||||
|
||||
// shift particle positions (this has to be done as the same shift
|
||||
// is used when computing the convolution kernel for SPH baryons)
|
||||
xx[coord] += 0.5 * h;
|
||||
|
||||
xx[coord] = (xx[coord] + (*gh.get_grid(ilevel))(i, j, k)) * boxSize;
|
||||
|
||||
gas_data[count++] = xx[coord];
|
||||
}
|
||||
|
||||
if (count != npart)
|
||||
throw std::runtime_error("Internal consistency error while writing coarse DM pos");
|
||||
|
||||
// calculate modified DM coordinates if: multimass and baryons present
|
||||
if (doBaryons && npcoarse) {
|
||||
double facb = omega_b / omega0;
|
||||
double facc = (omega0 - omega_b) / omega0;
|
||||
|
||||
std::vector<T> dm_data(npcoarse);
|
||||
|
||||
writeHDF5_b("Coordinates", coord, coarsePartType, dm_data, true); // read coarse DM vels
|
||||
|
||||
// overwrite
|
||||
for (size_t i = 0; i < npcoarse; i++) {
|
||||
dm_data[i] = facc * dm_data[i] + facb * gas_data[npfine + i];
|
||||
dm_data[i] = fmod(dm_data[i] + boxSize, boxSize) * posFac;
|
||||
}
|
||||
|
||||
writeHDF5_b("Coordinates", coord, coarsePartType, dm_data); // overwrite coarse DM vels
|
||||
}
|
||||
|
||||
// restrict gas_data to fine only and request write
|
||||
// std::vector<float> data( gas_data.begin() + 0, gas_data.begin() + npfine );
|
||||
|
||||
std::vector<T> data(npfine);
|
||||
|
||||
for (size_t i = 0; i < npfine; i++)
|
||||
data[i] = (T)(fmod(gas_data[i] + boxSize, boxSize) * posFac);
|
||||
|
||||
std::vector<double>().swap(gas_data); // deallocate
|
||||
|
||||
writeHDF5_b("Coordinates", coord, GAS_PARTTYPE, data); // write highres gas
|
||||
}
|
||||
|
||||
public:
|
||||
swift_output_plugin(config_file &cf) : output_plugin(cf) {
|
||||
// ensure that everyone knows we want to do SPH, implies: bsph=1, bbshift=1, decic_baryons=1
|
||||
// -> instead of just writing gas densities (which are here ignored), the gas displacements are also written
|
||||
cf.insertValue("setup", "do_SPH", "yes");
|
||||
|
||||
// init header and config parameters
|
||||
nPartTotal = std::vector<long long>(NTYPES, 0);
|
||||
massTable = std::vector<double>(NTYPES, 0.0);
|
||||
|
||||
coarsePartType = cf.getValueSafe<unsigned>("output", "swift_coarsetype", COARSE_DM_DEFAULT_PARTTYPE);
|
||||
UnitLength_in_cm = cf.getValueSafe<double>("output", "swift_unitlength", 3.085678e24); // 1.0 Mpc
|
||||
UnitMass_in_g = cf.getValueSafe<double>("output", "swift_unitmass", 1.989e43); // 1.0e10 solar masses
|
||||
UnitVelocity_in_cm_per_s = cf.getValueSafe<double>("output", "swift_unitvel", 1e5); // 1 km/sec
|
||||
|
||||
omega0 = cf.getValue<double>("cosmology", "Omega_m");
|
||||
omega_b = cf.getValue<double>("cosmology", "Omega_b");
|
||||
omega_L = cf.getValue<double>("cosmology", "Omega_L");
|
||||
redshift = cf.getValue<double>("setup", "zstart");
|
||||
boxSize = cf.getValue<double>("setup", "boxlength");
|
||||
doBaryons = cf.getValueSafe<bool>("setup", "baryons", false);
|
||||
useLongIDs = cf.getValueSafe<bool>("output", "swift_longids", false);
|
||||
numFiles = cf.getValueSafe<unsigned>("output", "swift_num_files", 1);
|
||||
doublePrec = cf.getValueSafe<bool>("output", "swift_doubleprec", 0);
|
||||
|
||||
for (unsigned i = 0; i < numFiles; i++)
|
||||
nPart.push_back(std::vector<unsigned int>(NTYPES, 0));
|
||||
|
||||
// factors which multiply positions and velocities
|
||||
time = 1.0 / (1.0 + redshift);
|
||||
posFac = 3.085678e24 / UnitLength_in_cm; // MUSIC uses Mpc internally, i.e. posFac=1e3 for kpc output
|
||||
velFac = boxSize;
|
||||
|
||||
// critical density
|
||||
rhoCrit = 27.7519737; // in h^2 1e10 M_sol / Mpc^3
|
||||
rhoCrit *= pow(UnitLength_in_cm / 3.085678e24, 3.0);
|
||||
rhoCrit *= (1.989e43 / UnitMass_in_g);
|
||||
|
||||
// calculate PMGRID suggestion
|
||||
pmgrid = pow(2, levelmin_) * 2; // unigrid
|
||||
gridboost = 1;
|
||||
|
||||
if (levelmin_ != levelmax_) {
|
||||
double lxref[3], x0ref[3], x1ref[3];
|
||||
double pmgrid_new;
|
||||
|
||||
the_region_generator->get_AABB(x0ref, x1ref, levelmax_); // generalized beyond box
|
||||
for (int i = 0; i < 3; i++)
|
||||
lxref[i] = x1ref[i] - x0ref[i];
|
||||
|
||||
// fraction box length of the zoom region
|
||||
lxref[0] = pow((lxref[0] * lxref[1] * lxref[2]), 0.333);
|
||||
|
||||
pmgrid_new = pow(2, levelmax_) * 2; // to cover entire box at highest resolution
|
||||
pmgrid_new *= lxref[0]; // only need to cover a fraction
|
||||
|
||||
if ((gridboost = round(pmgrid_new / pmgrid)) > 1)
|
||||
gridboost = pow(2, ceil(log(gridboost) / log(2.0))); // round to nearest, higher power of 2
|
||||
if (gridboost == 0)
|
||||
gridboost = 1;
|
||||
}
|
||||
|
||||
// calculate Tini for gas
|
||||
hubbleParam = cf.getValue<double>("cosmology", "H0") / 100.0;
|
||||
|
||||
double astart = 1.0 / (1.0 + redshift);
|
||||
double h2 = hubbleParam * hubbleParam;
|
||||
double adec = 1.0 / (160.0 * pow(omega_b * h2 / 0.022, 2.0 / 5.0));
|
||||
double Tcmb0 = 2.726;
|
||||
|
||||
rhoCrit *= h2;
|
||||
posFac /= hubbleParam;
|
||||
|
||||
Tini = astart < adec ? Tcmb0 / astart : Tcmb0 / astart / astart * adec;
|
||||
|
||||
// calculate softening suggestion
|
||||
softening = (boxSize * posFac) / pow(2, levelmax_) / 40.0;
|
||||
|
||||
// header and sanity checks
|
||||
if (!doBaryons)
|
||||
massTable[HIGHRES_DM_PARTTYPE] = omega0 * rhoCrit * pow(boxSize * posFac, 3.0) / pow(2, 3 * levelmax_);
|
||||
else
|
||||
massTable[HIGHRES_DM_PARTTYPE] =
|
||||
(omega0 - omega_b) * rhoCrit * pow(boxSize * posFac, 3.0) / pow(2, 3 * levelmax_);
|
||||
|
||||
if (coarsePartType == GAS_PARTTYPE || coarsePartType == HIGHRES_DM_PARTTYPE)
|
||||
throw std::runtime_error("Error: Specified illegal Swift particle type for coarse particles.");
|
||||
if (coarsePartType == STAR_PARTTYPE)
|
||||
LOGWARN("WARNING: Specified coarse particle type will collide with stars if USE_SFR enabled.");
|
||||
|
||||
// create file(s)
|
||||
for (unsigned i = 0; i < numFiles; i++) {
|
||||
std::string filename = fname_;
|
||||
if (numFiles > 1) {
|
||||
size_t pos = filename.find(".hdf5");
|
||||
if (pos != filename.length() - 5)
|
||||
throw std::runtime_error("Error: Unexpected output filename (doesn't end in .hdf5).");
|
||||
|
||||
std::stringstream s;
|
||||
s << "." << i << ".hdf5";
|
||||
filename.replace(pos, 5, s.str());
|
||||
}
|
||||
|
||||
HDFCreateFile(filename);
|
||||
|
||||
// create particle type groups
|
||||
std::stringstream GrpName;
|
||||
GrpName << "PartType" << HIGHRES_DM_PARTTYPE;
|
||||
|
||||
HDFCreateGroup(filename, GrpName.str().c_str()); // highres or unigrid DM
|
||||
|
||||
if (doBaryons) {
|
||||
GrpName.str("");
|
||||
GrpName << "PartType" << GAS_PARTTYPE;
|
||||
HDFCreateGroup(filename, GrpName.str().c_str()); // gas
|
||||
}
|
||||
|
||||
if (levelmax_ != levelmin_) // multimass
|
||||
{
|
||||
GrpName.str("");
|
||||
GrpName << "PartType" << coarsePartType;
|
||||
HDFCreateGroup(filename, GrpName.str().c_str()); // coarse DM
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
~swift_output_plugin() {}
|
||||
|
||||
/* ------------------------------------------------------------------------------- */
|
||||
void write_dm_mass(const grid_hierarchy &gh) {
|
||||
if (!doublePrec)
|
||||
__write_dm_mass<float>(gh);
|
||||
else
|
||||
__write_dm_mass<double>(gh);
|
||||
}
|
||||
|
||||
void write_dm_position(int coord, const grid_hierarchy &gh) {
|
||||
if (!doublePrec)
|
||||
__write_dm_position<float>(coord, gh);
|
||||
else
|
||||
__write_dm_position<double>(coord, gh);
|
||||
}
|
||||
|
||||
void write_dm_velocity(int coord, const grid_hierarchy &gh) {
|
||||
if (!doublePrec)
|
||||
__write_dm_velocity<float>(coord, gh);
|
||||
else
|
||||
__write_dm_velocity<double>(coord, gh);
|
||||
}
|
||||
|
||||
void write_dm_density(const grid_hierarchy &gh) { /* skip */
|
||||
}
|
||||
|
||||
void write_dm_potential(const grid_hierarchy &gh) { /* skip */
|
||||
}
|
||||
|
||||
/* ------------------------------------------------------------------------------- */
|
||||
void write_gas_velocity(int coord, const grid_hierarchy &gh) {
|
||||
if (!doublePrec)
|
||||
__write_gas_velocity<float>(coord, gh);
|
||||
else
|
||||
__write_gas_velocity<double>(coord, gh);
|
||||
}
|
||||
|
||||
void write_gas_position(int coord, const grid_hierarchy &gh) {
|
||||
if (!doublePrec)
|
||||
__write_gas_position<float>(coord, gh);
|
||||
else
|
||||
__write_gas_position<double>(coord, gh);
|
||||
}
|
||||
|
||||
void write_gas_density(const grid_hierarchy &gh) {
|
||||
// if only saving highres gas, then all gas cells have the same initial mass
|
||||
// do not write out densities as we write out displacements
|
||||
if (doBaryons)
|
||||
massTable[GAS_PARTTYPE] = omega_b * rhoCrit * pow(boxSize * posFac, 3.0) / pow(2, 3 * levelmax_);
|
||||
}
|
||||
|
||||
void write_gas_potential(const grid_hierarchy &gh) { /* skip */
|
||||
}
|
||||
|
||||
void finalize(void) {
|
||||
// generate and add contiguous IDs for each particle type we have written
|
||||
generateAndWriteIDs();
|
||||
|
||||
std::vector<unsigned int> nPartTotalLW(nPartTotal.size());
|
||||
std::vector<unsigned int> nPartTotalHW(nPartTotal.size());
|
||||
for (size_t i = 0; i < nPartTotalHW.size(); i++) {
|
||||
nPartTotalHW[i] = (unsigned)((size_t)nPartTotal[i] >> 32);
|
||||
nPartTotalLW[i] = (unsigned int)((size_t)nPartTotal[i]);
|
||||
}
|
||||
|
||||
// output particle counts
|
||||
std::cout << " - Swift : wrote " << nPartTotAllTypes << " particles..." << std::endl;
|
||||
for (size_t i = 0; i < nPartTotal.size(); i++)
|
||||
std::cout << " type [" << i << "] : " << std::setw(12) << nPartTotal[i] << std::endl;
|
||||
std::cout << std::endl;
|
||||
|
||||
// write final header (some of these fields are required, others are extra info)
|
||||
for (unsigned i = 0; i < numFiles; i++) {
|
||||
std::string filename = fname_;
|
||||
if (numFiles > 1) {
|
||||
std::stringstream s;
|
||||
s << "." << i << ".hdf5";
|
||||
filename.replace(filename.find(".hdf5"), 5, s.str());
|
||||
|
||||
std::cout << " " << filename;
|
||||
for (size_t j = 0; j < nPart[i].size(); j++)
|
||||
std::cout << " " << std::setw(10) << nPart[i][j];
|
||||
std::cout << std::endl;
|
||||
}
|
||||
|
||||
// Write UNITS header using the physical constants assumed internally by SWIFT
|
||||
HDFCreateGroup(filename, "Units");
|
||||
HDFWriteGroupAttribute(filename, "Units", "Unit mass in cgs (U_M)", 1.98841e43); // 10^10 Msun in grams
|
||||
HDFWriteGroupAttribute(filename, "Units", "Unit length in cgs (U_L)", 3.08567758149e24); // 1 Mpc in cm
|
||||
HDFWriteGroupAttribute(filename, "Units", "Unit time in cgs (U_t)", 3.08567758149e19); // so that unit vel is 1 km/s
|
||||
HDFWriteGroupAttribute(filename, "Units", "Unit current in cgs (U_I)", 1.0); // 1 Ampere
|
||||
HDFWriteGroupAttribute(filename, "Units", "Unit temperature in cgs (U_T)", 1.0); // 1 Kelvin
|
||||
|
||||
HDFCreateGroup(filename, "Header");
|
||||
|
||||
HDFWriteGroupAttribute(filename, "Header", "NumPart_ThisFile", nPart[i]);
|
||||
HDFWriteGroupAttribute(filename, "Header", "NumPart_Total", nPartTotalLW);
|
||||
HDFWriteGroupAttribute(filename, "Header", "NumPart_Total_HighWord", nPartTotalHW);
|
||||
HDFWriteGroupAttribute(filename, "Header", "NumPartTypes", massTable.size());
|
||||
HDFWriteGroupAttribute(filename, "Header", "MassTable", massTable);
|
||||
HDFWriteGroupAttribute(filename, "Header", "InitialMassTable", massTable);
|
||||
HDFWriteGroupAttribute(filename, "Header", "BoxSize", boxSize / hubbleParam); //might prefer / hubble_param OR have Swift deal with h factors
|
||||
HDFWriteGroupAttribute(filename, "Header", "NumFilesPerSnapshot", numFiles);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Dimension", 3);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Time", time);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Redshift", redshift);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Scale-factor", redshift);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Omega0", omega0); //this might be CDM plus baryons
|
||||
HDFWriteGroupAttribute(filename, "Header", "OmegaLambda", omega_L);
|
||||
HDFWriteGroupAttribute(filename, "Header", "OmegaBaryon", omega_b);
|
||||
HDFWriteGroupAttribute(filename, "Header", "HubbleParam", hubbleParam);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Flag_Sfr", 0);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Flag_Cooling", 0);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Flag_StellarAge", 0);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Flag_Metals", 0);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Flag_Feedback", 0);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Flag_DoublePrecision", (int)doublePrec);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Music_levelmin", levelmin_);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Music_levelmax", levelmax_);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Music_levelcounts", levelcounts);
|
||||
HDFWriteGroupAttribute(filename, "Header", "longIDs", (int)useLongIDs);
|
||||
HDFWriteGroupAttribute(filename, "Header", "suggested_pmgrid", pmgrid);
|
||||
// HDFWriteGroupAttribute(filename, "Header", "suggested_gridboost", gridboost);
|
||||
HDFWriteGroupAttribute(filename, "Header", "suggested_highressoft", softening);
|
||||
// HDFWriteGroupAttribute(filename, "Header", "suggested_gas_Tinit", Tini);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Flag_Entropy_ICs", 0);
|
||||
HDFWriteGroupAttribute(filename, "Header", "Virtual", 0);
|
||||
HDFWriteGroupAttribute(filename, "Header", "ThisFile", i);
|
||||
HDFWriteGroupAttribute(filename, "Header", "TimeBase_dloga", 3.20238316e-17); // copied this from first snapshot of swift agora sim
|
||||
HDFWriteGroupAttribute(filename, "Header", "TimeBase_dt", 5.91490951e-20); // same as above
|
||||
|
||||
HDFCreateGroup(filename, "ICs_parameters");
|
||||
HDFWriteGroupAttribute(filename, "ICs_parameters", "Code", std::string("MUSIC-Panphasia"));
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Git Revision", std::string(GIT_REV));
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Git Tag", std::string(GIT_TAG));
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Git Branch", std::string(GIT_BRANCH));
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Precision", std::string(CMAKE_PRECISION_STR));
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Convolutions", std::string(CMAKE_CONVOLVER_STR));
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "PLT", std::string(CMAKE_PLT_STR));
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "LPT Order", order);
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Particle Load", load);
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Transfer Function", tf);
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Cosmology Parameter Set", cosmo_set);
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Random Generator", rng);
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Mode Fixing", do_fixing);
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Mode inversion", do_invert);
|
||||
HDFWriteGroupAttribute(filename, "ICs_parameters", "Baryons", (int)doBaryons);
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Baryons Relative Velocity", do_baryonsVrel);
|
||||
// HDFWriteGroupAttribute(fname_, "ICs_parameters", "Grid Resolution", L);
|
||||
|
||||
HDFCreateGroup(filename, "Cosmology");
|
||||
HDFWriteGroupAttribute(filename, "Cosmology", "Omega_b", omega_b);
|
||||
HDFWriteGroupAttribute(filename, "Cosmology", "Omega_cdm", omega0 - omega_b); //since omega0 + omega_L = 1
|
||||
HDFWriteGroupAttribute(filename, "Cosmology", "Omega_lambda", omega_L);
|
||||
HDFWriteGroupAttribute(filename, "Cosmology", "h", hubbleParam);
|
||||
|
||||
}
|
||||
|
||||
// give config/parameter file hints
|
||||
if (useLongIDs)
|
||||
std::cout << " - Swift: Wrote 64bit IDs, enable LONGIDS." << std::endl;
|
||||
if (doublePrec)
|
||||
std::cout << " - Swift: Double precision ICs, set INPUT_IN_DOUBLEPRECISION." << std::endl;
|
||||
if (NTYPES != 6)
|
||||
std::cout << " - Swift: Using [" << NTYPES << "] particle types, set NTYPES to match." << std::endl;
|
||||
if (doBaryons)
|
||||
std::cout << " - Swift: Wrote high-res gas (only), set REFINEMENT_HIGH_RES_GAS and GENERATE_GAS_IN_ICS with "
|
||||
<< "SPLIT_PARTICLE_TYPE=" << pow(2, coarsePartType) << "." << std::endl;
|
||||
if (levelmax_ != levelmin_)
|
||||
std::cout << " - Swift: Have zoom type ICs, set PLACEHIGHRESREGION=" << pow(2, HIGHRES_DM_PARTTYPE)
|
||||
<< " (suggest PMGRID=" << pmgrid << " with GRIDBOOST=" << gridboost << ")." << std::endl;
|
||||
else
|
||||
std::cout << " - Swift: Have unigrid type ICs (suggest PMGRID=" << pmgrid << ")." << std::endl;
|
||||
if (levelmax_ > levelmin_ + 1)
|
||||
std::cout << " - Swift: More than one coarse DM mass using same type, set INDIVIDUAL_GRAVITY_SOFTENING="
|
||||
<< pow(2, coarsePartType) << " (+" << pow(2, STAR_PARTTYPE) << " if including stars)." << std::endl;
|
||||
if (doBaryons)
|
||||
std::cout << " - Swift: Set initial gas temperature to " << std::fixed << std::setprecision(3) << Tini << " K."
|
||||
<< std::endl;
|
||||
std::cout << " - Swift: Suggest grav softening = " << std::setprecision(3) << softening << " for high res DM."
|
||||
<< std::endl;
|
||||
}
|
||||
};
|
||||
|
||||
namespace {
|
||||
output_plugin_creator_concrete<swift_output_plugin> creator("swift");
|
||||
}
|
||||
|
||||
#endif // HAVE_HDF5
|
||||
|
|
@ -337,9 +337,9 @@ void RNG_panphasia::fill_grid(int level, DensityGrid<real_t> &R) {
|
|||
LOGINFO("ileft_corner_p[0,1,2] = (%d,%d,%d)",ileft_corner_p[0],ileft_corner_p[1],ileft_corner_p[2]);
|
||||
LOGINFO("nxremap[0,1,2] = (%d,%d,%d)",nxremap[0],nxremap[1],nxremap[2]);
|
||||
|
||||
size_t ngp = nxremap[0] * nxremap[1] * (nxremap[2] + 2);
|
||||
size_t ngp = (size_t)nxremap[0] * (size_t)nxremap[1] * (size_t)(nxremap[2] + 2); //size_t should be long unsigned int
|
||||
|
||||
pr0 = new fftw_real[ngp];
|
||||
pr0 = new fftw_real[ngp]; //fftw_real is either double or float depending on SINGLEPRECISION being set.
|
||||
pr1 = new fftw_real[ngp];
|
||||
pr2 = new fftw_real[ngp];
|
||||
pr3 = new fftw_real[ngp];
|
||||
|
|
|
|||
BIN
rand.mod
BIN
rand.mod
Binary file not shown.
BIN
rand_base.mod
BIN
rand_base.mod
Binary file not shown.
BIN
rand_int.mod
BIN
rand_int.mod
Binary file not shown.
Loading…
Reference in a new issue