228 commits

Author	SHA1	Message	Date
Oliver Hahn	1451f6e4e0	fix compiler error with Intel C++	2020-08-20 17:02:48 +02:00
Oliver Hahn	af990c6edd	cleaned up output of growth factors	2020-08-16 20:53:32 +02:00
Oliver Hahn	65746bac92	added possibility to have unallocated grids which can be allocated when needed	2020-08-16 20:48:31 +02:00
Oliver Hahn	950fe6b597	fixes to removal of 3a 3b split	2020-08-16 17:41:21 +02:00
Oliver Hahn	a525c595f4	added output of transfer functions along with power spectra	2020-08-14 19:09:29 +02:00
Oliver Hahn	66e801bcc2	added functions (unused) to compute global maxima/minima	2020-08-14 19:08:41 +02:00
Oliver Hahn	53a7dc3af0	fixed wrong individual particle masses with MPI	2020-07-05 14:26:53 +02:00
Oliver Hahn	0f54c30ca2	added particle mass output for grafic plugin	2020-07-02 03:20:45 +02:00
Oliver Hahn	a8e135c5e1	added first version of perturbed masses for multi-fluid	2020-07-02 01:27:53 +02:00
Oliver Hahn	73d4b53657	fixed a few 'fabs' that were 'abs'	2020-06-04 14:10:46 +02:00
Oliver Hahn	c8b1fd538c	fixed bugs with ID generation for Lagrangian codes	2020-05-25 18:55:40 +02:00
Oliver Hahn	dddd84eca6	fixes to how IDs are generated	2020-05-24 13:01:14 +02:00
Oliver Hahn	01fdd973e7	WIP: higher order baryons	2020-05-23 16:14:37 +02:00
Oliver Hahn	68ae67f3db	WIP: higher order baryons	2020-05-23 15:12:51 +02:00
Oliver Hahn	dcfa7ee318	WIP: baryon ICs	2020-05-22 18:44:15 +02:00
Oliver Hahn	658a8ad418	cleanup	2020-05-04 10:34:58 +02:00
Oliver Hahn	fc448a21a0	some cleanup / compilation problem fixes	2020-05-04 02:09:42 +02:00
Oliver Hahn	0a6f8f51cb	fixed bug in grid shifting with MPI (affects bcc and fcc)	2020-05-04 02:09:03 +02:00
Oliver Hahn	68aa31c59a	fixed forgotten boundary update	2020-05-04 01:13:07 +02:00
Oliver Hahn	9ebe27cb68	mpi bugfixes, refactoring of particle creation	2020-05-04 00:49:11 +02:00
Oliver Hahn	226a9303db	bug fixes to glass with MPI	2020-05-03 21:20:22 +02:00
Oliver Hahn	bae1701cb5	fixed compiler errors when not using MPI	2020-05-03 16:15:40 +02:00
Oliver Hahn	dd4688953c	working commit, glass	2020-05-03 04:20:12 +02:00
Oliver Hahn	1313905660	working commit	2020-05-03 00:14:47 +02:00
Oliver Hahn	b534c7ff35	fixed normalisation of CLASS when using ztarget and zstart	2020-05-02 21:02:24 +02:00
Oliver Hahn	52dfa9a72d	Fill_Grid member function cannot be const	2020-05-02 15:02:16 +02:00
Oliver Hahn	0cafcfea19	added function to check if Nyquist mode to grd	2020-05-02 15:01:09 +02:00
Oliver Hahn	83b8d9bbaf	moved math headers to subdirectory	2020-04-04 23:59:13 +02:00
Oliver Hahn	5d60b59f6c	removed superfluous grid operators	2020-04-04 21:35:16 +02:00
Oliver Hahn	096513e7e8	moved git version info to cmake_config.hh.in	2020-04-04 20:59:28 +02:00
Oliver Hahn	3f17e5a796	more naming convention homogenisation	2020-04-04 20:55:24 +02:00
Oliver Hahn	06b3a84bd3	naming convention homogenisation	2020-04-04 20:39:52 +02:00
Oliver Hahn	2315515305	renaming (csoca->music)	2020-04-04 20:27:51 +02:00
Oliver Hahn	734948c2a1	minor fixes	2020-04-04 01:24:05 +02:00
Oliver Hahn	c9fce7f210	fixed bug that Omega_k was not set	2020-04-03 07:04:41 +02:00
Oliver Hahn	b99597d300	updates fo cmake template header, forgotten in previous commit	2020-04-03 00:54:10 +02:00
Oliver Hahn	0678489386	fixed some nyquist plane errors in convolutions	2020-04-02 19:58:57 +02:00
Oliver Hahn	6dabf65ab2	added template cmake_config file that was forgotten in previous commit	2020-04-02 19:58:34 +02:00
Oliver Hahn	b8b9db3b99	made precision switchable from makefile	2020-04-02 19:57:41 +02:00
Oliver Hahn	3a8a22737f	major update of class plugin	2020-04-02 19:25:54 +02:00
Oliver Hahn	4aba654797	wrapped interpolation into its own class, also transfer functions can come pre-normalised now	2020-04-02 12:48:52 +02:00
Oliver Hahn	809a03d59e	more parameters and verbosity in cosmo parameters	2020-04-02 12:45:24 +02:00
Oliver Hahn	f5a9006299	some refactoring, mostly just homogenizing function names	2020-04-02 11:18:21 +02:00
Oliver Hahn	0d3a17b253	rewrote cosmology parameters and background evolution with full integration of 2nd order ODE	2020-03-29 14:49:17 +02:00
Oliver Hahn	23edbd63a9	added custom ODE integration module	2020-03-29 14:46:53 +02:00
Oliver Hahn	8423161d6b	added new vector type for vectorized operations	2020-03-29 14:46:25 +02:00
Oliver Hahn	a587ad6b3e	some refactoring (add '_t' to vec3 and mat3)	2020-03-29 14:45:43 +02:00
Oliver Hahn	ab2db06990	added useful physical constants	2020-03-29 14:42:55 +02:00
Oliver Hahn	0abe891f86	added ID offset for baryon particles to avoid duplicate IDs	2020-03-10 19:01:44 +01:00
Oliver Hahn	8855c75f43	Merge branch 'constraint' into develop	2020-03-01 17:41:44 +01:00
Oliver Hahn	a1a5e614cf	fixed compilation error	2020-03-01 17:37:57 +01:00
Oliver Hahn	6c027d7094	fixed PLT correction interpolation	2020-03-01 17:21:17 +01:00
Oliver Hahn	5698315308	working commit	2020-02-28 18:35:26 +01:00
Oliver Hahn	77f9f06ebc	working commit, PLT interpolation	2020-02-28 18:03:48 +01:00
Oliver Hahn	2dfab2b267	working commit	2020-02-28 16:15:37 +01:00
Oliver Hahn	89f660f059	Merge branch 'develop' into constraint	2020-02-24 18:14:24 +01:00
Oliver Hahn	816a52d4da	added reading routine from HDF5	2020-02-24 18:10:09 +01:00
Oliver Hahn	2b66058619	fixed dual lattice two-fluid ICs	2020-01-26 21:42:07 +01:00
Oliver Hahn	1fc2b2d677	added distinct amplitudes for cdm and baryons	2020-01-25 23:31:03 +01:00
Oliver Hahn	a2f4cbb434	Merge branch 'dev-plt' of https://bitbucket.org/ohahn/monofonic into develop	2020-01-25 16:36:08 +01:00
Oliver Hahn	f7b2519b82	working commit, changes for multi-species, moved mean matter PT outside of species loop	2020-01-25 16:20:29 +01:00
Oliver Hahn	89c5f2758b	added support for writing multiple species, staggered grids	2020-01-24 15:00:32 +01:00
Oliver Hahn	2ef654f22a	small optimizations	2019-12-19 13:54:24 +01:00
Oliver Hahn	6178b2f215	zeroed nyquist modes in plt	2019-12-05 22:26:16 +01:00
Oliver Hahn	6a998123c7	improved implementation of plt field interpolation	2019-12-05 05:43:49 +01:00
Oliver Hahn	d8cbc4fca6	improved PLT field interpolation, still has problems for FCC though	2019-12-04 14:26:42 +01:00
Oliver Hahn	beb40bfc35	added non-PLT back into the game. has to be switched by hand in ic_generator.cc right now...	2019-12-02 18:47:34 +01:00
Oliver Hahn	df791bbbc4	added interpolation of all fields, plt seems to work for all lattices, projection needs testing still	2019-12-02 01:04:03 +01:00
Oliver Hahn	06fa3c128e	added interpolation to approximate infinite lattice	2019-12-01 20:10:58 +01:00
Oliver Hahn	0de486f552	added gridding back of dynamical matrix to ordinary Fourier space	2019-12-01 18:52:53 +01:00
Oliver Hahn	1d10f51941	more minor cleanup	2019-12-01 15:40:24 +01:00
Oliver Hahn	a71795cbb3	added other lattice types to dynamical matrix calculation	2019-12-01 15:04:25 +01:00
Oliver Hahn	0ea91247e2	working commit: optimizations/cleanup	2019-12-01 14:34:28 +01:00
Oliver Hahn	dcc59368ed	working commit: dynamical matrix for bcc seems right, interpolation doesn't work yet, also too slow	2019-12-01 11:28:17 +01:00
Oliver Hahn	2cce64977a	bcc plt working commit	2019-11-29 15:41:22 +01:00
Oliver Hahn	68d3aa4a4c	working commit PLT other lattices	2019-11-27 16:23:43 +01:00
Oliver Hahn	9a36cc13fd	unified calculation of growth factor and growth rate	2019-11-15 23:19:57 +01:00
Oliver Hahn	89ec1775f3	fixed inconsistency between NGENIC random numbers generated with MPI and without	2019-11-15 22:32:09 +01:00
Oliver Hahn	07b430f25c	removed unused code to fill grids with random numbers	2019-11-15 11:54:16 +01:00
Oliver Hahn	675ba19a95	working commit, fft grids can be non-distributed memory even when using MPI	2019-11-14 15:36:39 +01:00
Oliver Hahn	5de14003c0	working commit	2019-11-14 14:09:24 +01:00
Oliver Hahn	dc2564994f	minor cleanup	2019-11-06 17:55:09 +01:00
Oliver Hahn	d075e496be	added correction of growth rates	2019-11-06 14:06:19 +01:00
Oliver Hahn	88ac5ab19a	fix PS normalisation with PLT proj correction	2019-11-06 11:44:32 +01:00
Oliver Hahn	144d0d9e1a	added projection onto plt eigenmodes. (not working)	2019-11-05 19:14:14 +01:00
Oliver Hahn	747031bee2	added calculation of Brillouin zone (from Bruno's Code)	2019-11-05 00:29:33 +01:00
Oliver Hahn	6d1a3bf7cc	minor cleanup, calculation of D works for SC	2019-11-04 00:25:45 +01:00
Oliver Hahn	06264bfb51	PLT: output of eigenvalues and vectors to HDF5	2019-11-03 17:04:49 +01:00
Oliver Hahn	9356870841	fixed bug where eigenvectors and coordinate indices were mixed up	2019-11-03 17:04:05 +01:00
Oliver Hahn	40be27c36f	started implementation of PLT (working commit)	2019-11-03 15:54:17 +01:00
Oliver Hahn	a5253bcace	cosmetic changes	2019-11-01 13:16:05 +01:00
Oliver Hahn	68080d2545	added possibility to write 32 or 64bit positions and ids	2019-11-01 12:03:02 +01:00
Oliver Hahn	d80bf34c10	added file headers	2019-11-01 12:02:09 +01:00
Oliver Hahn	eb2743c61b	removal of more deprecated member functions	2019-11-01 12:01:39 +01:00
Oliver Hahn	1ebc5f2ff7	removed deprecated member function	2019-11-01 10:46:31 +01:00
Oliver Hahn	c593a7067d	cleanup particle generator	2019-11-01 04:49:40 +01:00
Oliver Hahn	248c460b71	rewrote particle load generator, added new load (refined sc lattice)	2019-11-01 04:47:02 +01:00
Oliver Hahn	9a3ebc2bec	updates to vec3 class, mostly arithmetics	2019-11-01 04:45:34 +01:00
Oliver Hahn	fa1abffd0d	minor cleanup	2019-10-27 19:49:54 +01:00
Oliver Hahn	4de579ca78	revert back to C++14 by replacing inline lambdas with template funcs	2019-10-24 17:12:43 +02:00