import pickle from dataclasses import dataclass from enum import Enum from pathlib import Path from pprint import pprint from typing import List, Tuple import h5py import numpy as np import pandas as pd from matplotlib import pyplot as plt from matplotlib.axes import Axes from matplotlib.colors import LogNorm from matplotlib.figure import Figure from cic import cic_from_radius from halo_mass_profile import halo_mass_profile from nfw import fit_nfw from paths import auriga_dir, richings_dir from readfiles import read_file, read_halo_file, ParticlesMeta from utils import read_swift_config, print_wall_time class Mode(Enum): richings = 1 auriga6 = 2 mode = Mode.richings def dir_name_to_parameter(dir_name: str): return map(int, dir_name.lstrip("auriga6_halo").lstrip("richings21_").lstrip("bary_").split("_")) def levelmax_to_softening_length(levelmax: int) -> float: box_size = 100 return box_size / 30 / 2 ** levelmax fig1: Figure = plt.figure(figsize=(9, 6)) ax1: Axes = fig1.gca() fig2: Figure = plt.figure(figsize=(9, 6)) ax2: Axes = fig2.gca() for ax in [ax1, ax2]: ax.set_xlabel(r'R [Mpc]') ax1.set_ylabel(r'M [$10^{10} \mathrm{M}_\odot$]') ax2.set_ylabel("density [$\\frac{10^{10} \\mathrm{M}_\\odot}{Mpc^3}$]") part_numbers = [] reference_file = Path(f"auriga_reference_{mode}.pickle") centers = {} @dataclass class Result: title: str rho: np.ndarray levels: Tuple[int, int, int] images = [] vmin = np.Inf vmax = -np.Inf root_dir = auriga_dir if mode == Mode.auriga6 else richings_dir i = 0 for dir in sorted(root_dir.glob("*")): if not dir.is_dir() or "bak" in dir.name: continue is_by_adrian = "arj" in dir.name print(dir.name) if not is_by_adrian: levelmin, levelmin_TF, levelmax = dir_name_to_parameter(dir.name) print(levelmin, levelmin_TF, levelmax) # if levelmax != 9: # continue input_file = dir / "output_0007.hdf5" if mode == Mode.richings: input_file = dir / "output_0004.hdf5" if is_by_adrian: input_file = dir / "output_0000.hdf5" softening_length = None else: try: swift_conf = read_swift_config(dir) print_wall_time(dir) except FileNotFoundError: continue gravity_conf = swift_conf["Gravity"] softening_length = gravity_conf["comoving_DM_softening"] assert softening_length == gravity_conf["max_physical_DM_softening"] if "max_physical_baryon_softening" in gravity_conf: assert softening_length == gravity_conf["max_physical_baryon_softening"] assert softening_length == gravity_conf["comoving_baryon_softening"] ideal_softening_length = levelmax_to_softening_length(levelmax) if not np.isclose(softening_length, levelmax_to_softening_length(levelmax)): raise ValueError(f"softening length for levelmax {levelmax} should be {ideal_softening_length} " f"but is {softening_length}") print(input_file) if mode == Mode.richings and is_by_adrian: h = 0.6777 with h5py.File(dir / "Richings_object_z0.h5") as f: df = pd.DataFrame(f["Coordinates"][:] / h, columns=["X", "Y", "Z"]) particles_meta = ParticlesMeta(particle_mass=1.1503e7 / 1e10) center = np.array([60.7, 29, 64]) / h softening_length = None else: df, particles_meta = read_file(input_file) df_halos = read_halo_file(input_file.with_name("fof_" + input_file.name)) # vr_halo = read_velo_halos(dir, veloname="velo_out").loc[1] # particles_in_halo = df.loc[df["FOFGroupIDs"] == 3] halo_id = 1 while True: particles_in_halo = df.loc[df["FOFGroupIDs"] == halo_id] if len(particles_in_halo) > 1: break halo_id += 1 halo = df_halos.loc[halo_id] part_numbers.append(len(df) * particles_meta.particle_mass) # halo = halos.loc[1] center = np.array([halo.X, halo.Y, halo.Z]) log_radial_bins, bin_masses, bin_densities, center = halo_mass_profile( df, center, particles_meta, plot=False, num_bins=100, vmin=0.002, vmax=6.5 ) i_min_border = np.argmax(0.01 < log_radial_bins) # first bin outside of specific radius i_max_border = np.argmax(1.5 < log_radial_bins) popt = fit_nfw(log_radial_bins[i_min_border:i_max_border], bin_densities[i_min_border:i_max_border]) # = rho_0, r_s print(popt) # # Plot NFW profile # ax.loglog( # log_radial_bins[i_min_border:i_max_border], # nfw(log_radial_bins[i_min_border:i_max_border], *popt), # linestyle="dotted" # ) centers[dir.name] = center if is_by_adrian: with reference_file.open("wb") as f: pickle.dump([log_radial_bins, bin_masses, bin_densities], f) ax1.loglog(log_radial_bins[:-1], bin_masses, label=str(dir.name), c=f"C{i}") ax2.loglog(log_radial_bins[:-1], bin_densities, label=str(dir.name), c=f"C{i}") if reference_file.exists() and not is_by_adrian: with reference_file.open("rb") as f: data: List[np.ndarray] = pickle.load(f) ref_log_radial_bins, ref_bin_masses, ref_bin_densities = data mass_deviation: np.ndarray = np.abs(bin_masses - ref_bin_masses) density_deviation: np.ndarray = np.abs(bin_densities - ref_bin_densities) ax1.loglog(log_radial_bins[:-1], mass_deviation, c=f"C{i}", linestyle="dotted") ax2.loglog(log_radial_bins[:-1], density_deviation, c=f"C{i}", linestyle="dotted") accuracy = mass_deviation / ref_bin_masses print(accuracy) print("mean accuracy", accuracy.mean()) if softening_length: for ax in [ax1, ax2]: ax.axvline(4 * softening_length, color=f"C{i}", linestyle="dotted") # for ax in [ax1, ax2]: # ax.axvline(vr_halo.Rvir, color=f"C{i}", linestyle="dashed") X, Y, Z = df.X.to_numpy(), df.Y.to_numpy(), df.Z.to_numpy() # shift: (-6, 0, -12) # if not is_by_adrian: # xshift = Xc - Xc_adrian # yshift = Yc - Yc_adrian # zshift = Zc - Zc_adrian # print("shift", xshift, yshift, zshift) X -= center[0] Y -= center[1] Z -= center[2] rho, extent = cic_from_radius(X, Z, 1000, 0, 0, 5, periodic=False) vmin = min(vmin, rho.min()) vmax = max(vmax, rho.max()) images.append(Result( rho=rho, title=str(dir.name), levels=(levelmin, levelmin_TF, levelmax) if levelmin else None )) i += 1 # plot_cic( # rho, extent, # title=str(dir.name) # ) ax1.legend() ax2.legend() # fig3: Figure = plt.figure(figsize=(9, 9)) # axes: List[Axes] = fig3.subplots(3, 3, sharex=True, sharey=True).flatten() fig3: Figure = plt.figure(figsize=(9, 9)) axes: List[Axes] = fig3.subplots(3, 3, sharex=True, sharey=True).flatten() for result, ax in zip(images, axes): data = 1.1 + result.rho vmin_scaled = 1.1 + vmin vmax_scaled = 1.1 + vmax img = ax.imshow(data.T, norm=LogNorm(vmin=vmin_scaled, vmax=vmax_scaled), extent=extent, origin="lower") ax.set_title(result.title) fig3.tight_layout() fig3.subplots_adjust(right=0.825) cbar_ax = fig3.add_axes([0.85, 0.15, 0.05, 0.7]) fig3.colorbar(img, cax=cbar_ax) fig1.savefig(Path(f"~/tmp/auriga1.pdf").expanduser()) fig2.savefig(Path(f"~/tmp/auriga2.pdf").expanduser()) fig3.savefig(Path("~/tmp/auriga3.pdf").expanduser()) pprint(centers) plt.show() print(part_numbers)