from pathlib import Path from typing import Tuple import pandas as pd import yaml from matplotlib import pyplot as plt from matplotlib.axes import Axes from matplotlib.figure import Figure def print_progress(i, total, extra_data=""): print(f"{i} of {total} ({extra_data})" + " " * 20, end="\r" if i != total else "\n", flush=True) def memory_usage(df: pd.DataFrame): bytes_used = df.memory_usage(index=True).sum() return bytes_used / 1024 / 1024 def create_figure() -> Tuple[Figure, Axes]: """ helper function for matplotlib OOP interface with proper typing """ fig: Figure = plt.figure() ax: Axes = fig.gca() return fig, ax def read_swift_config(dir: Path): with (dir / "used_parameters.yml").open() as f: return yaml.safe_load(f) def print_wall_time(dir: Path): with(dir / "swift.log").open() as f: last_line = f.readlines()[-1] print(last_line) assert "main: done. Bye." in last_line seconds = float(last_line[1:].split("]")[0]) print(f"Runtime: {seconds / 60 / 60:.2f} hours") def figsize_from_page_fraction(columns=1, height_to_width=3 / 4): cm = 1 / 2.54 # centimeters in inches # \printinunitsof{cm}\prntlen{\linewidth} two_column_width = 17.85162 # cm one_colum_width = 8.5744 # cm upscale_factor = 1.3 width = two_column_width if columns == 2 else one_colum_width height = width * height_to_width return width * cm * upscale_factor, height * cm * upscale_factor def rowcolumn_labels(axes, labels, isrow: bool, pad=5) -> None: """ based on https://stackoverflow.com/a/25814386/4398037 """ axs = axes[:, 0] if isrow else axes[0] for ax, label in zip(axs, labels): ax: Axes if isrow: xy = (0, 0.5) xytext = (-ax.yaxis.labelpad - pad, 0) xycoords = ax.yaxis.label ha = 'right' va = 'center' else: xy = (0.5, 1) xytext = (0, pad) xycoords = 'axes fraction' ha = 'center' va = 'baseline' ax.annotate(label, xy=xy, xytext=xytext, xycoords=xycoords, textcoords='offset points', size='large', ha=ha, va=va)