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MUSIC/mg_solver.hh

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/*
mg_solver.hh - This file is part of MUSIC -
a code to generate multi-scale initial conditions
for cosmological simulations
Copyright (C) 2010 Oliver Hahn
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
#ifndef __MG_SOLVER_HH
#define __MG_SOLVER_HH
#include <cmath>
#include <iostream>
#include "mg_operators.hh"
#include "mg_interp.hh"
#include "mesh.hh"
#define BEGIN_MULTIGRID_NAMESPACE namespace multigrid {
#define END_MULTIGRID_NAMESPACE }
BEGIN_MULTIGRID_NAMESPACE
namespace opt {
enum smtype { sm_jacobi, sm_gauss_seidel, sm_sor };
}
template< class S, class I, class O, typename T=double >
class solver
{
public:
typedef S scheme;
typedef O mgop;
typedef I interp;
protected:
scheme m_scheme;
mgop m_gridop;
unsigned m_npresmooth, m_npostsmooth;
opt::smtype m_smoother;
unsigned m_ilevelmin;
const static bool m_bperiodic = true;
std::vector<double> m_residu_ini;
bool m_is_ini;
GridHierarchy<T> *m_pu, *m_pf, *m_pfsave;
const MeshvarBnd<T> *m_pubnd;
double compute_error( const MeshvarBnd<T>& u, const MeshvarBnd<T>& unew );
double compute_error( const GridHierarchy<T>& uh, const GridHierarchy<T>& uhnew, bool verbose );
double compute_RMS_resid( const GridHierarchy<T>& uh, const GridHierarchy<T>& fh, bool verbose );
protected:
void Jacobi( T h, MeshvarBnd<T>* u, const MeshvarBnd<T>* f );
void GaussSeidel( T h, MeshvarBnd<T>* u, const MeshvarBnd<T>* f );
void SOR( T h, MeshvarBnd<T>* u, const MeshvarBnd<T>* f );
void twoGrid( unsigned ilevel );
void setBC( unsigned ilevel );
void make_periodic( MeshvarBnd<T> *u );
//void interp_coarse_fine_cubic( unsigned ilevel, MeshvarBnd<T>& coarse, MeshvarBnd<T>& fine );
public:
solver( GridHierarchy<T>& f, opt::smtype smoother, unsigned npresmooth, unsigned npostsmooth );
~solver()
{ }
double solve( GridHierarchy<T>& u, double accuracy, double h=-1.0, bool verbose=false );
double solve( GridHierarchy<T>& u, double accuracy, bool verbose=false )
{
return this->solve ( u, accuracy, -1.0, verbose );
}
};
template< class S, class I, class O, typename T >
solver<S,I,O,T>::solver( GridHierarchy<T>& f, opt::smtype smoother, unsigned npresmooth, unsigned npostsmooth )
: m_scheme(), m_gridop(), m_npresmooth( npresmooth ), m_npostsmooth( npostsmooth ),
2010-07-03 01:17:14 +02:00
m_smoother( smoother ), m_ilevelmin( f.levelmin() ), m_is_ini( true ), m_pf( &f )
{
m_is_ini = true;
// TODO: maybe later : add more than one refinement region, then we need the mask
//... initialize the refinement mask
//m_pmask = new GridHierarchy<bool>( f.m_nbnd );
//m_pmask->create_base_hierarchy(f.levelmin());
/*for( unsigned ilevel=f.levelmin()+1; ilevel<=f.levelmax(); ++ilevel )
{
meshvar_bnd* pf = f.get_grid(ilevel);
m_pmask->add_patch( pf->offset(0), pf->offset(1), pf->offset(2), pf->size(0), pf->size(1), pf->size(2) );
}
m_pmask->zero();
for( unsigned ilevel=0; ilevel<f.levelmin(); ++ilevel )
{
MeshvarBnd<T> *pf = f.get_grid(ilevel);
for( int ix=0; ix < (int)pf->size(0); ++ix )
for( int iy=0; iy < (int)pf->size(1); ++iy )
for( int iz=0; iz < (int)pf->size(2); ++iz )
(*m_pmask->get_grid(ilevel))(ix,iy,iz) = true;
}
for( unsigned ilevel=m_ilevelmin; ilevel<f.levelmax(); ++ilevel )
{
MeshvarBnd<T>* pf = f.get_grid(ilevel+1);//, *pfc = f.get_grid(ilevel);
for( int ix=pf->offset(0); ix < (int)(pf->offset(0)+pf->size(0)/2); ++ix )
for( int iy=pf->offset(1); iy < (int)(pf->offset(1)+pf->size(1)/2); ++iy )
for( int iz=pf->offset(2); iz < (int)(pf->offset(2)+pf->size(2)/2); ++iz )
(*m_pmask->get_grid(ilevel))(ix,iy,iz) = true;
}
*/
}
template< class S, class I, class O, typename T >
void solver<S,I,O,T>::Jacobi( T h, MeshvarBnd<T> *u, const MeshvarBnd<T>* f )
{
int
nx = u->size(0),
ny = u->size(1),
nz = u->size(2);
double
c0 = -1.0/m_scheme.ccoeff(),
h2 = h*h;
MeshvarBnd<T> uold(*u);
double alpha = 0.95, ialpha = 1.0-alpha;
#pragma omp parallel for
for( int ix=0; ix<nx; ++ix )
for( int iy=0; iy<ny; ++iy )
for( int iz=0; iz<nz; ++iz )
(*u)(ix,iy,iz) = ialpha * uold(ix,iy,iz) + alpha * (m_scheme.rhs( uold, ix, iy, iz ) + h2 * (*f)(ix,iy,iz))*c0;
}
template< class S, class I, class O, typename T >
void solver<S,I,O,T>::SOR( T h, MeshvarBnd<T> *u, const MeshvarBnd<T>* f )
{
int
nx = u->size(0),
ny = u->size(1),
nz = u->size(2);
double
c0 = -1.0/m_scheme.ccoeff(),
h2 = h*h;
MeshvarBnd<T> uold(*u);
double
alpha = 1.2,
//alpha = 2 / (1 + 4 * atan(1.0) / double(u->size(0)))-1.0, //.. ideal alpha
ialpha = 1.0-alpha;
#pragma omp parallel for
for( int ix=0; ix<nx; ++ix )
for( int iy=0; iy<ny; ++iy )
for( int iz=0; iz<nz; ++iz )
if( (ix+iy+iz)%2==0 )
(*u)(ix,iy,iz) = ialpha * uold(ix,iy,iz) + alpha * (m_scheme.rhs( uold, ix, iy, iz ) + h2 * (*f)(ix,iy,iz))*c0;
#pragma omp parallel for
for( int ix=0; ix<nx; ++ix )
for( int iy=0; iy<ny; ++iy )
for( int iz=0; iz<nz; ++iz )
if( (ix+iy+iz)%2!=0 )
(*u)(ix,iy,iz) = ialpha * uold(ix,iy,iz) + alpha * (m_scheme.rhs( *u, ix, iy, iz ) + h2 * (*f)(ix,iy,iz))*c0;
}
template< class S, class I, class O, typename T >
void solver<S,I,O,T>::GaussSeidel( T h, MeshvarBnd<T>* u, const MeshvarBnd<T>* f )
{
int
nx = u->size(0),
ny = u->size(1),
nz = u->size(2);
T
c0 = -1.0/m_scheme.ccoeff(),
h2 = h*h;
for( int color=0; color < 2; ++color )
#pragma omp parallel for
for( int ix=0; ix<nx; ++ix )
for( int iy=0; iy<ny; ++iy )
for( int iz=0; iz<nz; ++iz )
if( (ix+iy+iz)%2 == color )
(*u)(ix,iy,iz) = (m_scheme.rhs( *u, ix, iy, iz ) + h2 * (*f)(ix,iy,iz))*c0;
}
template< class S, class I, class O, typename T >
void solver<S,I,O,T>::twoGrid( unsigned ilevel )
{
MeshvarBnd<T> *uf, *uc, *ff, *fc;
T
h = 1.0/(pow(2.0,ilevel)),
c0 = -1.0/m_scheme.ccoeff(),
h2 = h*h;
uf = m_pu->get_grid(ilevel);
ff = m_pf->get_grid(ilevel);
uc = m_pu->get_grid(ilevel-1);
fc = m_pf->get_grid(ilevel-1);
int
nx = uf->size(0),
ny = uf->size(1),
nz = uf->size(2);
if( m_bperiodic && ilevel <= m_ilevelmin)
make_periodic( uf );
else if(!m_bperiodic)
setBC( ilevel );
//... do smoothing sweeps with specified solver
for( unsigned i=0; i<m_npresmooth; ++i ){
if( ilevel > m_ilevelmin )
interp().interp_coarse_fine(ilevel,*uc,*uf);
if( m_smoother == opt::sm_gauss_seidel )
GaussSeidel( h, uf, ff );
else if( m_smoother == opt::sm_jacobi )
Jacobi( h, uf, ff);
else if( m_smoother == opt::sm_sor )
SOR( h, uf, ff );
if( m_bperiodic && ilevel <= m_ilevelmin )
make_periodic( uf );
}
m_gridop.restrict( *uf, *uc );
//... essential!!
if( m_bperiodic && ilevel <= m_ilevelmin )
make_periodic( uc );
else if( ilevel > m_ilevelmin )
interp().interp_coarse_fine(ilevel,*uc,*uf);
meshvar_bnd Lu(*uf,false);
Lu.zero();
#pragma omp parallel for
for( int ix=0; ix<nx; ++ix )
for( int iy=0; iy<ny; ++iy )
for( int iz=0; iz<nz; ++iz )
Lu(ix,iy,iz) = m_scheme.apply( (*uf), ix, iy, iz )/h2;
meshvar_bnd tLu(*uc,false);
//... restrict Lu
m_gridop.restrict( Lu, tLu );
Lu.deallocate();
//... restrict source term
m_gridop.restrict( *ff, *fc );
int oi, oj, ok;
oi = ff->offset(0);
oj = ff->offset(1);
ok = ff->offset(2);
#pragma omp parallel for
for( int ix=oi; ix<oi+(int)ff->size(0)/2; ++ix )
for( int iy=oj; iy<oj+(int)ff->size(1)/2; ++iy )
for( int iz=ok; iz<ok+(int)ff->size(2)/2; ++iz )
(*fc)(ix,iy,iz) += ((tLu( ix, iy, iz ) - (m_scheme.apply( *uc, ix, iy, iz )/(4.0*h2))));
tLu.deallocate();
meshvar_bnd ucsave(*uc,true);
//... have we reached the end of the recursion or do we need to go up one level?
if( ilevel == 1 )
if( m_bperiodic )
(*uc)(0,0,0) = 0.0;
else
(*uc)(0,0,0) = (m_scheme.rhs( (*uc), 0, 0, 0 ) + 4.0 * h2 * (*fc)(0,0,0))*c0;
else
twoGrid( ilevel-1 );
meshvar_bnd cc(*uc,false);
//... compute correction on coarse grid
#pragma omp parallel for
for( int ix=0; ix<(int)cc.size(0); ++ix )
for( int iy=0; iy<(int)cc.size(1); ++iy )
for( int iz=0; iz<(int)cc.size(2); ++iz )
cc(ix,iy,iz) = (*uc)(ix,iy,iz) - ucsave(ix,iy,iz);
ucsave.deallocate();
if( m_bperiodic && ilevel <= m_ilevelmin )
make_periodic( &cc );
m_gridop.prolong_add( cc, *uf );
//... interpolate and apply coarse-fine boundary conditions on fine level
if( m_bperiodic && ilevel <= m_ilevelmin )
make_periodic( uf );
else if(!m_bperiodic)
setBC( ilevel );
//... do smoothing sweeps with specified solver
for( unsigned i=0; i<m_npostsmooth; ++i ){
if( ilevel > m_ilevelmin )
interp().interp_coarse_fine(ilevel,*uc,*uf);
if( m_smoother == opt::sm_gauss_seidel )
GaussSeidel( h, uf, ff );
else if( m_smoother == opt::sm_jacobi )
Jacobi( h, uf, ff);
else if( m_smoother == opt::sm_sor )
SOR( h, uf, ff );
if( m_bperiodic && ilevel <= m_ilevelmin )
make_periodic( uf );
}
}
template< class S, class I, class O, typename T >
double solver<S,I,O,T>::compute_error( const MeshvarBnd<T>& u, const MeshvarBnd<T>& unew )
{
int
nx = u.size(0),
ny = u.size(1),
nz = u.size(2);
double err = 0.0;
unsigned count = 0;
#pragma omp parallel for reduction(+:err,count)
for( int ix=0; ix<nx; ++ix )
for( int iy=0; iy<ny; ++iy )
for( int iz=0; iz<nz; ++iz )
if( fabs(unew(ix,iy,iz)) > 0.0 )//&& u(ix,iy,iz) != unew(ix,iy,iz) )
{
err += fabs(1.0 - u(ix,iy,iz)/unew(ix,iy,iz));
++count;
}
if( count != 0 )
err /= count;
return err;
}
template< class S, class I, class O, typename T >
double solver<S,I,O,T>::compute_error( const GridHierarchy<T>& uh, const GridHierarchy<T>& uhnew, bool verbose )
{
double maxerr = 0.0;
for( unsigned ilevel=uh.levelmin(); ilevel <= uh.levelmax(); ++ilevel )
{
double err = 0.0;
err = compute_error( *uh.get_grid(ilevel), *uhnew.get_grid(ilevel) );
if( verbose )
std::cout << " Level " << std::setw(6) << ilevel << ", Error = " << err << std::endl;
maxerr = std::max(maxerr,err);
}
return maxerr;
}
template< class S, class I, class O, typename T >
double solver<S,I,O,T>::compute_RMS_resid( const GridHierarchy<T>& uh, const GridHierarchy<T>& fh, bool verbose )
{
if( m_is_ini )
m_residu_ini.assign( uh.levelmax()+1, 0.0 );
double maxerr=0.0;
for( unsigned ilevel=uh.levelmin(); ilevel <= uh.levelmax(); ++ilevel )
{
int
nx = uh.get_grid(ilevel)->size(0),
ny = uh.get_grid(ilevel)->size(1),
nz = uh.get_grid(ilevel)->size(2);
double h = 1.0/pow(2,ilevel), h2=h*h, err;
double sum = 0.0;
unsigned count = 0;
#pragma omp parallel for reduction(+:sum,count)
for( int ix=0; ix<nx; ++ix )
for( int iy=0; iy<ny; ++iy )
for( int iz=0; iz<nz; ++iz )
{
double r = (m_scheme.apply( *uh.get_grid(ilevel), ix, iy, iz )/h2 + (*fh.get_grid(ilevel))(ix,iy,iz));
sum += r*r;
++count;
}
if( m_is_ini )
m_residu_ini[ilevel] = sqrt(sum)/count;
err = sqrt(sum)/count/m_residu_ini[ilevel];
if( verbose && !m_is_ini )
std::cout << " Level " << std::setw(6) << ilevel << ", Error = " << err << std::endl;
if( err > maxerr )
maxerr = err;
}
if( m_is_ini )
m_is_ini = false;
return maxerr;
}
template< class S, class I, class O, typename T >
double solver<S,I,O,T>::solve( GridHierarchy<T>& uh, double acc, double h, bool verbose )
{
double err;
unsigned niter = 0;
bool fullverbose = false;
m_pu = &uh;
//... iterate ...//
while (true)
{
twoGrid( uh.levelmax() );
err = compute_RMS_resid( *m_pu, *m_pf, fullverbose );
++niter;
if( verbose ){
std::cout << " - Step No. " << std::setw(3) << niter << ", Max Err = " << err << std::endl;
if(fullverbose)
std::cout << " ---------------------------------------------------\n";
}
if( (niter > 1) && ((err < acc) || (niter > 20)) )
break;
}
if( err > acc )
std::cout << "Error : no convergence in Poisson solver" << std::endl;
else if( verbose )
std::cout << " - Converged in " << niter << " steps to req. acc. of " << acc << std::endl;
//.. make sure that the RHS does not contain the FAS corrections any more
for( int i=m_pf->levelmax(); i>0; --i )
m_gridop.restrict( *m_pf->get_grid(i), *m_pf->get_grid(i-1) );
return err;
}
//TODO: this only works for 2nd order! (but actually not needed)
template< class S, class I, class O, typename T >
void solver<S,I,O,T>::setBC( unsigned ilevel )
{
//... set only on level before additional refinement starts
if( ilevel == m_ilevelmin )
{
MeshvarBnd<T> *u = m_pu->get_grid(ilevel);
int
nx = u->size(0),
ny = u->size(1),
nz = u->size(2);
for( int iy=0; iy<ny; ++iy )
for( int iz=0; iz<nz; ++iz )
{
(*u)(-1,iy,iz) = 2.0*(*m_pubnd)(-1,iy,iz) - (*u)(0,iy,iz);
(*u)(nx,iy,iz) = 2.0*(*m_pubnd)(nx,iy,iz) - (*u)(nx-1,iy,iz);;
}
for( int ix=0; ix<nx; ++ix )
for( int iz=0; iz<nz; ++iz )
{
(*u)(ix,-1,iz) = 2.0*(*m_pubnd)(ix,-1,iz) - (*u)(ix,0,iz);
(*u)(ix,ny,iz) = 2.0*(*m_pubnd)(ix,ny,iz) - (*u)(ix,ny-1,iz);
}
for( int ix=0; ix<nx; ++ix )
for( int iy=0; iy<ny; ++iy )
{
(*u)(ix,iy,-1) = 2.0*(*m_pubnd)(ix,iy,-1) - (*u)(ix,iy,0);
(*u)(ix,iy,nz) = 2.0*(*m_pubnd)(ix,iy,nz) - (*u)(ix,iy,nz-1);
}
}
}
//... enforce periodic boundary conditions
template< class S, class I, class O, typename T >
void solver<S,I,O,T>::make_periodic( MeshvarBnd<T> *u )
{
int
nx = u->size(0),
ny = u->size(1),
nz = u->size(2);
int nb = u->m_nbnd;
//if( u->offset(0) == 0 )
for( int iy=-nb; iy<ny+nb; ++iy )
for( int iz=-nb; iz<nz+nb; ++iz )
{
int iiy( (iy+ny)%ny ), iiz( (iz+nz)%nz );
for( int i=-nb; i<0; ++i )
{
(*u)(i,iy,iz) = (*u)(nx+i,iiy,iiz);
(*u)(nx-1-i,iy,iz) = (*u)(-1-i,iiy,iiz);
}
}
//if( u->offset(1) == 0 )
for( int ix=-nb; ix<nx+nb; ++ix )
for( int iz=-nb; iz<nz+nb; ++iz )
{
int iix( (ix+nx)%nx ), iiz( (iz+nz)%nz );
for( int i=-nb; i<0; ++i )
{
(*u)(ix,i,iz) = (*u)(iix,ny+i,iiz);
(*u)(ix,ny-1-i,iz) = (*u)(iix,-1-i,iiz);
}
}
//if( u->offset(2) == 0 )
for( int ix=-nb; ix<nx+nb; ++ix )
for( int iy=-nb; iy<ny+nb; ++iy )
{
int iix( (ix+nx)%nx ), iiy( (iy+ny)%ny );
for( int i=-nb; i<0; ++i )
{
(*u)(ix,iy,i) = (*u)(iix,iiy,nz+i);
(*u)(ix,iy,nz-1-i) = (*u)(iix,iiy,-1-i);
}
}
}
END_MULTIGRID_NAMESPACE
#endif